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Multiple alignment of contact maps | IEEE Conference Publication | IEEE Xplore

Multiple alignment of contact maps


Abstract:

We show that multiple structure alignment (MStA) using contact maps is equivalent to the problem of finding a sample mean of contact maps. From this result, we derive a s...Show More

Abstract:

We show that multiple structure alignment (MStA) using contact maps is equivalent to the problem of finding a sample mean of contact maps. From this result, we derive a subgradient method for solving the MStA method. Experiments show that the proposed algorithm is a flexible alignment method that provides an excellent tradeoff between accuracy and speed.
Date of Conference: 14-19 June 2009
Date Added to IEEE Xplore: 31 July 2009
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Conference Location: Atlanta, GA, USA
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